We are developing a new tool to analyze phospho-proteomics data. To access it, please visit: https://rokai.io/explorer
RoKAI is a computational tool for inferring kinase activities in a robust manner using functional networks.
RoKAI is designed by Serhan Yilmaz and Mehmet Koyuturk at Case Western Reserve University.
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How to cite us?
Yilmaz S., Ayati M., Schlatzer D., Cicek A. E., Chance M. R., Koyuturk M. (2021) Robust inference of kinase activity using functional networksNature Communications 12 (1117)
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Minguez, P. et al. (2012) PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins.Nucleic acids research 41(D1), D306-D311
Szklarczyk, D. et al. (2014) STRING v10: protein–protein interaction networks, integrated over the tree of life.Nucleic acids research 43(D1), D447-D452
Damle, N. P., & Köhn, M. (2019) The human DEPhOsphorylation Database DEPOD: 2019 update.Database